Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKENFWSELPRPFFILAPMEDVTDIVFRHVVSEAARPDVFFTEFTNTESFCHPEGIHSVRGRLTFSEDEHPMVAHIWGDKPEQFRETSIQLAKMGFKGIDLNMGCPVANVAKKGKGSGLILRPDVAAEIIQATKAG-GLPVSVKTRLGYYEI---DEWKDWLKHVFEQDIANLSIHLRTRKEMSKV--DAHWELIEAIKNLRDEIAPNTLLTINGDIPDRKTGLELAEKYGIDGVMIGRGIFHNPFAFEKEPRE-------HTSKELLDLLRLHLSLFNKYE-KDEIRQFKSLRRFFKIYVRGIRGASELRHQLMNTQSIAEARALLDEFEAQMDEDVKIEL |
| 3B0P Chain:A ((4-318)) | -----------PRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRG--NRE--RLLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSAL-----IPPLRHDWVHRLKGDF----PQLTFVTNGGIRSLEEALFHLK--RVDGVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEE---EVLKGT--PPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEEVGE------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3B0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -139337 for 2459 contacts (-56.7/contact) +
2D Compatibility (PS) -31991 + (NN) -22376 + (LL) 3176
1D Compatibility (HY) -12000 + (ID) 3700
Total energy: -206228.0 ( -83.87 by residue)
QMean score : 0.492
|
|
|