Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYYSYGNYEAFARPKKPENVENKSAYLIGSGLASLAAACFLIRDGQMEGSKIHILEELPKAGGSLDGENMPLKGYVVRGGREMEN---HFECLWDLFRSIPSLEIDNASVLDEFYWLNKEDPNYSRCRVIEKQGQRLV-TDGDFTLTKTAIKEILDLCLTN---EEDLDDVKITDVFSDDFFNS----NFWIYWKTM-FAFEP-WHSAMEMRRYLMRFVHHIGGLADFSALKFTKYNQYESLVLPMVEYLKSHGVQFEYDVKVEDIKVDVTTSQKIAREILIHRHGKAESIKLTVDDLVFVTNGSITESSTYGDNDTPAPPTDELGGSWTLWKNLARQSPEFGNPDKFCQNIPKKSWFVSATSTTNNKEIIDTIESICKRDPLAGKTVTGGIITINDSAWQMSFTINRQQQFKDQPENEISTWIYALYSDVNGDYIKKPITECSGNEICQEWLYHLGVSTDKIEDLAKHVSNTIPVYMPYITSYFMTRAIGDRPLVVPHQSQNLSFIGNFAETERDTVFTTEYSVRTAMEAVYQLLNIDRGIPEVINSTFDLRVLMDAVYELNDHQDLREITKDSKMQKLALAGFLKKIKGTYIETLLKEHKLL |
| 3NRN Chain:A ((1-263)) | ----------------------MRAVVVGAGLGGLLAGAFL----ARNGHEIIVLEKSAMIGGRFTNLP--YKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVE----IV----NSNP------KGKILWE-GKIFHYRESWKFLS--------KLLAEIRMNKLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAAL-------RWGGP-GLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIEEK----KV---YTR-DNEEY-----SFDVAISNVGVRETVKLIGR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NRN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91448 for 1650 contacts (-55.4/contact) +
2D Compatibility (PS) -24555 + (NN) -5718 + (LL) 22272
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: -106199.0 ( -64.36 by residue)
QMean score : 0.320
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