Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MNKLRDTTFLSYLFTIILWGSAFPMIKIALNDFSAESLSAFRLILATIILLPFVIIKKLPTPELRDIPVIFILGFCGFVIYHTALNFGETLISAGISGILVSTTPIFSSALAYIFLKEHFSKWNWLSSLVAFIGISIISISKDDYTTINVLGVFIILLASF------SESLYFTFQ-KKYIEKYGFIAFTLYTIMASSPFMLIFIPEIINDIHGATFTSIVSVLYLAIFPTIIPYVLLAYIVKSVGVSDATMSLYLTP---IVSLLLSYLLLDELPTT------LAIIGGIITLLGVSLSNFFQNT-------------------------- |
| 4MFL Chain:A ((23-345)) | MDPETVRIALGLEERTAAWLTELDELGPPAEPVRLPRGEEARDLLRRLEVP----ELDAEEIVAAAPDPD-RDPALWWLLERTHHAIVR---HMGDHRAKPRGGPPLPYEG---GAAARYFHVYVFLATVPAVRRFHAERGIP----DEVGWETLTQLGELVAIHRRKYGQGGMNMQWWTTYHLRGILYRLGRLQFSLATGKDGTPHLGLAVPEWGGPLLPKAYDESLHRAR-PFFDRHFPEHGARVAWGSSWMLDPQLEEYLTEDSNIIQLARFWTLTDSAPEPGNADGDSSILEFVFRYNGQPLDELPQRSSLERAVIAHLKAGRHWHMRTGFVKLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MFL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -267855 for 1997 contacts (-134.1/contact) +
2D Compatibility (PS) -27452 + (NN) 1570 + (LL) 2080
1D Compatibility (HY) -2400 + (ID) 2250
Total energy: -296307.0 ( -148.38 by residue)
QMean score : 0.202
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