Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKIRSFTILSLLIYLAMMCYTVVTYSKLPTKVPIHYNLAGDADNFADKWVLLLINSAFIVIWLIFFIAGRYYERFAKWSHYNHTPREIRAIKLFLSTLNLEIMSYMSIFTVLEIWQIQHHHQLNLLWFNMIFIIIIGLTLVIFCLLPTIHKMRDSQ |
| 4PJ0 Chain:R ((2-35)) | --------------------------------------------------------------DWRVLVVLLPVLLAAGWAVRNILPYAVKQVQKLL------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PJ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2888 for 134 contacts (-21.6/contact) +
2D Compatibility (PS) -3596 + (NN) 731 + (LL) 12544
1D Compatibility (HY) -1600 + (ID) 250
Total energy: 4941.0 ( 36.87 by residue)
QMean score : 0.213
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