Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIIYCITKADNGGAQTHLIQLANHFCVHHDVYVIVGNHGPMIEQLDARVNVIILEHLVGPIDFKQDILAVKVLAQLFSKIKPDVIHLHSSKAGTVGRIAKFISKSKDTRVVFTAHGWAFTEGVKPAKKFLYLVIEKLMSCITDSIICVSDFDKQLALKYRFNRLKLTTIHNGIADVPAVKQTLKSQSHNNIGEVVGMLPNKQDLQINAPTKHQFVMIARFAYPKLPQN-LIAAIEILKLHNS-NHAHFTFIGDG-PTLNDCQQQVVQAGLENDVTFLGNVINASHLLSQY---DTFILISKHEGLPISIIEAMATGLPVIASHVGGISELVA-DNGICMMNNQPETIAKVLEKY--LIDSDYIKMSNQSRKRYLECFTEEKMIKEVEDVYNGKSTQ |
| 3FRO Chain:A ((254-429)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEK--HGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAM-SFSWEKSAERYVKAYTG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115677 for 1218 contacts (-95.0/contact) +
2D Compatibility (PS) -18429 + (NN) -5670 + (LL) 16664
1D Compatibility (HY) -11200 + (ID) 2400
Total energy: -136712.0 ( -112.24 by residue)
QMean score : 0.561
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