Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKKVFIMDSVKTIIGTLLIALGLQFLAYPIINQRVGNEAFGSILTI------YTII-TITSVVLGNTLNNIRLINMNLYKSNHY-----YWKFVSILLISILIESIALIIVFLYFFNLNTIDIIFL---ILLNILMCLRIYLNVFFRMTLKYNQILYIALIQFLGLLIGLFLY---YLIQNWIVCFITSELFATIYTLVKLRGLTIGEYQSE-DNNVVKDYVMLLSTNSLNNLNLYLDRLILLPII---GGTAVTISFLSTFIGKMLATFLYPINNVVLSYISVNESDNIK------KQYLKTNLFAIAALCLVMIICYPITLIIVSLLYNIDSSLYSKFIILGNIGVLFNAVSIMIQTLNTKHASITLQANYMTLHTITFIFITILMTIAFGLNGFFWTTLFSNIIKYVILNIIGLKSKFINKKDVD------ |
| 3J9O Chain:B ((79-505)) | VIDKLIDLQVNSIISNDEFRALEQEWLKVQEVCQEDYDNVEVSILDVKKEELQYDFERNLYDISSSDFFKKVYVSEFDQYGGEPYGAILGLYNFENTTNDIIWLTGMGMVAKNSHAPFIASIDKSFFGVKDLSEITHIKSFEALLEHPRYKEWNDFRNLDVAAYIGLTVGDFMLRQPYNPENNPVQYKLMEGFNEFVDYDKNESYLWGPASIHLVKNMMRSYDKTRWFQYIRGVESGGYVKNLVACVYDNKGILETKSPLNVLFADYMELSLANIG--LIPFVSEKGTSNACFFSVNSAKKVEEFVDGFDSANSRLIANLSYTMCISRISHYIKCVIRDKIGSIVDVESIQKILSDWISEFVTT----VYQPTPLEMARYPFRNVSIEVKTIPGKPG--WYSCKINVIPHIQFEGMNTTMTIDTRLEPELFGTNN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J9O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -339400 for 2684 contacts (-126.5/contact) +
2D Compatibility (PS) -39512 + (NN) 20058 + (LL) 740
1D Compatibility (HY) -7600 + (ID) 2900
Total energy: -368614.0 ( -137.34 by residue)
QMean score : 0.013
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