Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFSQNLFRCPTPTCIVCRNWESNFSLLGPTPQLALPVEFLFEILCVGAPD
2JYP Chain:A ((3-17))
-----HSFRRPFHECALCYS-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1040 for 65 contacts (16.0/contact) +
2D Compatibility (PS) -1541 + (NN) -1446 + (LL) 2544
1D Compatibility (HY) -400 + (ID) 250
Total energy: -53.0 ( -0.82 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_2JYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JYP-query.scw
PDB file :
Tito_Scwrl_2JYP.pdb
: