Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGFSVYLGQPLDEAYIKRMIKQGYQMIFTSVQIPEEDDETKYHYFTKLLNLLKYEQVTYLIDANPSILTPSFYEHLRQYDAQFMIRIDHSTSIEAIEAIMAQGLKCCLNASIISRELLTSLHQQLNDFTLLSFCHNYYPRPDTGLSVDLVNKKNELIYQFNPKAQIYGFIVGSGLRGPLHKGLPTIEATRHSHPVVAAKLLQETGVSEVLVGDSLIEMRQAKQLIDFCKHRHFTLCIEEVFDTTV----TYLFDMCHKVRPDNPENVIRSETSRQICP---HSIQPQFTTQRRIGSVTVDNLNNGRYQGEMQIVRQTLSAHDNVNVVAQIIKEDLPLLSCIEPNDTFDFQKTRECKK |
3MML Chain:A ((176-287)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VELQVVPGPRDDWFVDPDILVRTNWLVTNRSDRVGMRLVGMPLEYRNPDRQL---PSEGATRGAIQVPP------NGFPVILGPDHPVTGGYPVIGVVTEEDIDKLGQVRPGQTVRLHWAY---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55417 for 769 contacts (-72.1/contact) +
2D Compatibility (PS) -11350 + (NN) -4238 + (LL) 17800
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -57905.0 ( -75.30 by residue)
QMean score : 0.265
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