Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVLITYQIILFFIISLSYYLTLNHYMAVTVGNFTSIFGMFAAILFM----YYYLLYKSPEYNQRKRFKHFIHITNLIIIAFSTFVLVHLALKLFFSI--------------------------
2KCK Chain:A ((1-112))
-----------MVDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2KCK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62019 for 528 contacts (-117.5/contact) +
2D Compatibility (PS) -8165 + (NN) 1030 + (LL) 1760
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -71544.0 ( -135.50 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_2KCK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KCK-query.scw
PDB file :
Tito_Scwrl_2KCK.pdb
: