Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKISKYIAIASLSVAVTVSAPQTTNSTAFAKSSAEVQQTQQASIPASQKANLGNQNIMAVAWYQNSAEAKALYLQGYNSAKTQLDKEIKKNKGKHKLAIALDLDETVLDNSP--YQGYAS--------IHNKPFPE----GWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYYISDRDKEKDLKATQKNLKQQGIPQAKKSHILLKGKDDKSKESRRQMVQKDHKLVMLFGDNLLDFTDPKEATAESREALIEKHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKAKDKLRKNAIKQFDPKTGEVK |
| 1Z5U Chain:A ((37-180)) | ---------------------------------------------------------------------------------------------GRPPMAVGFDIDDTVLFSSPGFWRGKKTYSPDSDDYLKNPAFWEKMNNGWDEF-----SIPKEAARQLIDMHVRRGDSIYFVTGRSQTKTETVSKTLADNFHIPAANMNPVIFAG--DKPEQNTKVQWLQEKNMRIFYGDSDNDITAARDC------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Z5U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 3975 for 911 contacts (4.4/contact) +
2D Compatibility (PS) -13767 + (NN) -3007 + (LL) 11472
1D Compatibility (HY) -7200 + (ID) 1650
Total energy: -10177.0 ( -11.17 by residue)
QMean score : 0.355
|
|
|