Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKRMRDDIKMVFEQDPAARSTLEVITTYAGLHAVWSHLIAHKLYNQKKYVAARAISQISRFFTGIEIHPGAKIGKRLFIDHGMGVVIGETCTIGDNVTIYQGVTL--------GGTGKERGKRHPDIGDNVLIAAGAKVLGNIKINSNVNIGANSVVLQSVPSYSTVV-GIPGHIVKQDGVRVGKTFDHRHLPDPIYEQIKHLERQLEKTRNGEIQDDYII
3P47 Chain:A ((103-270))
--RTLKTDLIAAYAGDPAAPGLSLIIRCYPGFQAVIVYRIAHVLYECGERYYCREMMESVHSYTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLGNIIVGSHVRIGANCWIDRDVDSNQTVYI----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3P47.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121328 for 1247 contacts (-97.3/contact) +
2D Compatibility (PS) -17408 + (NN) -5869 + (LL) 3120
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -158735.0 ( -127.29 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_3P47.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P47-query.scw
PDB file :
Tito_Scwrl_3P47.pdb
: