Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFIDIGGMHARAKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAGLTACYLLVNKAIRRGYKSMPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGMWKLSSDALHQAFN |
| 4DAJ Chain:D ((413-441)) | ------------------------------------------------------------------------------YWLCYINSTVN---------PVCYALCNKTFRTTFKTL---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4482 for 126 contacts (-35.6/contact) +
2D Compatibility (PS) -2937 + (NN) -567 + (LL) 8004
1D Compatibility (HY) -4800 + (ID) 600
Total energy: -5382.0 ( -42.71 by residue)
QMean score : -0.143
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