Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAITKINDCFELLSMVTYAD------KLKSLIKKEFSISFEEFAVLTYISENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIESLLSRVNKRITEANNEIEL
1Z9C Chain:A ((14-98))
------------LSFLLYASSREMTKQYKPLLDK-LNITYPQYLALLLLWEHET--LTVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSEEDERSVLI------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48033 for 472 contacts (-101.8/contact) +
2D Compatibility (PS) -7969 + (NN) -1187 + (LL) 4272
1D Compatibility (HY) -8800 + (ID) 1150
Total energy: -62867.0 ( -133.19 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_1Z9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z9C-query.scw
PDB file :
Tito_Scwrl_1Z9C.pdb
: