Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTRLKFQVDKDLLLAIVVGVCGSLVALAMFFLSGYMVTQSALGAPLYALMILVVTVKLFGFLRAITRYVERLISHKATFTMLRDIRVQFFGKLVNVIPNVYRKLSSSDLISRMISRVEALQNIYLRVYYPPVVIGLTALVTVIVLAFISIGHALLIMVSMLFTLLIVPWLSSKKARTLKKHAANEQARFLNHFYDYKAGMDELRRFNQINHYRDNLMAKLNHFDKLQLKEQRFLTIYDFILNIIAMLSIFGSLVLGLIQINAGQLNIIYMTSIVLMILTLFEQAVPMTNVAYYKADTDQALHDINEVI-----------SVPSTNGKKRLNDKYDATNIYEVKDASFKYWNQQTYVLSDINFNVNRGEKIAIVGPSGSGKSTLLQIMAGLYQLDSGSVRFENMDMFEIDDKDKFESLNVLLQSQQLFDGTIRQNLFTDEKDEAVQAIFKQLDLEHLAL--ERQIDLDGHTL------SGGEIQRLAITRMLLKDTASTWILDEPTTALDKQNSLKVMDLIEAH-AETLIVA-THDLTLLSRFETIIVMINGKIVEKGNYQQLLANQGALWNMIQYNA |
| 4PL0 Chain:A ((231-569)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYEDALTQENNAQKKYWLLSSKVLLL-NSLLAVILFGSVFIYNILGVLNGVVSIGHFIMITSYIILLST------PVENIGALLSEIRQSMSSLAGFIQRHAENKATSPSIPFLNMERKLN--------LSIRELSFSYSDDKK-ILNSVSLDLFTGKMYSLTGPSGSGKSTLVKIISGYYKNYFGDIYLNDISLRNISDEDLNDAIYYLTQDDYIFMDTLRFNLRLANYDASENEIFKVLKLANLSVVNNEPVSLDTHLINRGNNYSGGQKQRISLARLFLRKPA-IIIIDEATSALDYINESEILSSIRTHFPDALIINISHRINLLECSDCVYVLNEGNIVASGHFRDLMVSN----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PL0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125679 for 2166 contacts (-58.0/contact) +
2D Compatibility (PS) -33748 + (NN) -9265 + (LL) 23020
1D Compatibility (HY) -31200 + (ID) 4700
Total energy: -181572.0 ( -83.83 by residue)
QMean score : 0.379
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