Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYFVLAIFTIIS-------ASVSLGYS-IQACASSHNINAYYALSRSLPLFLLAIFSLVIHSAIFLI-------TISIAMILVQFLDAIVGYKSEDVFKTYGPLATSVVNLILLIVFLF-----
3F6G Chain:A ((1-123))
KVLTIKSCNIHSGIGIRPHAQIELEYQGKIHKEISEGDGGYDAFMNALTKITNRLGISIPKLIDYEVRIPPGGKTDALVETRITWNK---SLEEDQTFKTMGVHPDQTVAAVHATEKMLNQILQ
General information:
TITO was launched using:
RESULT:
Template:
3F6G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133111 for 706 contacts (-188.5/contact) +
2D Compatibility (PS) -11108 + (NN) -3228 + (LL) 540
1D Compatibility (HY) 1600 + (ID) 750
Total energy: -146057.0 ( -206.88 by residue)
QMean score : 0.315
(partial model without unconserved sides chains):
PDB file :
Tito_3F6G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F6G-query.scw
PDB file :
Tito_Scwrl_3F6G.pdb
: