Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTERILEVNDLHVSFDITAGEVQAVRGVDFYLNKGETLAIVGESGSGKSVTTKAITKLFQGDTGRIKKGEILFLGEDLAKKPENELIKLRGKDISMIFQDPMTSLNPTMQIGKQVMEPLIKHKNYSKAQAKKRALEILNLVGLPNAEKRFKAYPHQFSGGQRQRIVIATALACEPKVLIADEPTTALDVTMQAQILDLMKELQQKIDTAIIFITHDLGVVANIADRVAVMYGGQMVETGDVNEIFYDPKHPYTWGLLSSMPDLSTTNDTPLLAIPGAPPDLLHPPKGDAFARRSQYALDIDFKVEPPWFKVSPTHFVKSWLLDARAPKVELPELVKQRMKPMPNNYEKPLKVERVSFNEK |
| 4YMT Chain:J ((4-239)) | -------VNDVYKNF----GSLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCIN-LLEEPT----KGEVFIDGVKINNGKVN-INKVRQK-VGMVFQH--FNLFPHLTAIENITLAPVKVKKMNKKEAEELAVDLLAKVGLLDKKDQ---YPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANEGMTMVV-VTHEMGFAREVGDRVIFMDDGVIVEEGTPEEIFYRAKNERTREFLSKI---------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136996 for 1927 contacts (-71.1/contact) +
2D Compatibility (PS) -25830 + (NN) -13964 + (LL) 7232
1D Compatibility (HY) -20000 + (ID) 4550
Total energy: -194108.0 ( -100.73 by residue)
QMean score : 0.463
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