Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKISKALTWFIISFIIFHLILFIMWGEHQEYWYLYTGIMLIAGISYVFYQRDIESKRLLTSIGVGIITAIILIMLQL-LFSLITSNLSYSSLIKELARTGVNWKWQMLVTLLFVIPCHELYMRTVLQKELTHFSIPKWIAILITAICSSSLFIYLDNWWIVTFIFVAQVILSLSYEYTRRIATTSVAQIVAIILLLIFNA |
1G2Y Chain:B ((1-30)) | -------------------------------------------------------------------MVSKLSQLQTEMLAALLESGLSKEALIQAL-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4047 for 101 contacts (-40.1/contact) +
2D Compatibility (PS) -2803 + (NN) 342 + (LL) 18680
1D Compatibility (HY) 2400 + (ID) 50
Total energy: 14522.0 ( 143.78 by residue)
QMean score : -0.107
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