Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEIVIASNNQGKINDFKVIFPDYHVIGISELIPDFDVEETGSTFEENAILKSEAAAKALNKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNTTDRRAQFVCVISMSGPDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHRRNAINLLQAFLEGEKNV
2E5X Chain:A ((62-181))
----------------------------------------------------------------MIEDSGLFIESLKGFPGVYSSYVY-----RTIGLEGILKLMEGAEDRRAYFKSVIGFY-IDGKAYKFSGVTWGRISNEKRGTHGFGYDPIFIPEGSQKTFAEMTIEEKNALSHRGKA---LKAFFEWLK--
General information:
TITO was launched using:
RESULT:
Template:
2E5X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32211 for 887 contacts (-36.3/contact) +
2D Compatibility (PS) -13048 + (NN) -7715 + (LL) 4760
1D Compatibility (HY) -7600 + (ID) 2400
Total energy: -58214.0 ( -65.63 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_2E5X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E5X-query.scw
PDB file :
Tito_Scwrl_2E5X.pdb
: