Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNKLIAKSLLTIAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVR
2DO7 Chain:A ((835-882))
-------------------------------------------------------------------------------------------------------------------AIVRIMKMRKTLSHNLLVSEVYNQLKFPV--KPADLKKRIESLIDRDYME
General information:
TITO was launched using:
RESULT:
Template:
2DO7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7247 for 264 contacts (-27.5/contact) +
2D Compatibility (PS) -5349 + (NN) -2045 + (LL) 6984
1D Compatibility (HY) -4400 + (ID) 500
Total energy: -12557.0 ( -47.56 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_2DO7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DO7-query.scw
PDB file :
Tito_Scwrl_2DO7.pdb
: