Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLLQQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGNQSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLDRYQFLERLLQEIEKRYNQFLTLP---FSEIREEYIAASNIWNRTLLFTENDKQFKGQAIDLDYDGYLIVRDEAGESHRLISADIDF |
| 1WQW Chain:A ((16-232)) | ---------------------------------------------------------------------------------------FQEITSTNEFAKTSYL--EEGTVIVADKQTMGHGRLNRKWESPEG-GLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFSIDG-RIKWPNDVLVNYKKIAGVLVEGKG-----DKIVLGIGLNVNNKVPN-------GATSMKLELGSEVPLLSVFRSLITNLDRLYLNFLKNPMDILNLVRDNMILGVRV--KIL----GDGSFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102957 for 1704 contacts (-60.4/contact) +
2D Compatibility (PS) -22713 + (NN) -7672 + (LL) 6920
1D Compatibility (HY) -21600 + (ID) 3650
Total energy: -151672.0 ( -89.01 by residue)
QMean score : 0.389
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