Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKLNMNNEIKKVEQRLEKAIKSKDSV-LEQASLHLLSSGGKRVRPAFVILSSQF-GKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDN-------RV----------HQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINR-KTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISELPDGHPKSLLLSLTKKMGSRNT |
| 3KRF Chain:A ((8-271)) | -----MLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTA---MPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGM---------AEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTK----------------KTTYPKLIGVEKSKEFA---DRLNREAQEQ--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50767 for 1798 contacts (-28.2/contact) +
2D Compatibility (PS) -24036 + (NN) -12195 + (LL) 5744
1D Compatibility (HY) -17600 + (ID) 4100
Total energy: -102954.0 ( -57.26 by residue)
QMean score : 0.412
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