Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANIKSAIKRVKTTEKAEARNISQKSAMRTAVKNA-KTAVSNNADNKNELVSLAVKLVDKAAQSNLIHSNKADRIKSQLMTANK
1N34 Chain:T ((11-85))
-----SALKRHRQSLKRRLRNKAKKSAIKTLSKKAIQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLM----
General information:
TITO was launched using:
RESULT:
Template:
1N34.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -193 for 460 contacts (-0.4/contact) +
2D Compatibility (PS) -7930 + (NN) -2833 + (LL) 720
1D Compatibility (HY) -400 + (ID) 1450
Total energy: -12086.0 ( -26.27 by residue)
QMean score : 0.674
(partial model without unconserved sides chains):
PDB file :
Tito_1N34.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N34-query.scw
PDB file :
Tito_Scwrl_1N34.pdb
: