Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHYHFVGIKGSGMSSLAQIMHDLGHEVQGSDIENYVFTEVALRNKGIKILPFDANNIKEDMVVIQGNAFASSHEEIVRAHQLKLDVVSYNDFLGQIIDQYTSVAVTGAHGKTSTTGLLSHVMNGDKKTSFLIGD-GTGMGLP--------ESDYFAFEACEYRRHFLSY-----KPDYAIMTNIDFDHPDYFKDINDVFDAFQEM-AHNVKKG--IIAWGDDEHLRKIEADVPIYYYGFKDSDDIYAQNIQITDKGTAFDVYV-DGEFYDHFLSPQYGDHTVLNALAVIAISYLEKLDVTNIKEALETFGGVKRRFNETTIANQVIVDD-YAHHPREISATIETARKKYPHKEVVAVFQPHTFSRTQAFLNEFAESLSKADRVFLCEIFGSIRENTGALTIQDLIDKIEGASLINEDSINVLEQFDNAVVLFMGAGDIQKLQNAYLDKLGMKNAF |
| 4ZIY Chain:A ((121-373)) | ---------------------------------------------------------------------------------------------------QLKVIALTGSSGKTTTKEMLGSILSRLAPTLITRGNLNNDLGVPMMLLELRKEHQYAVMELGANHQGEIDYTSKIVQPHVAGILNIGTAH---FGGRDGICRAKSEIYRHILPQGVAIVPQQDDFTAEIREAAKSHQIMSFGAGGDVFATEIELLPQSANFQLHTPQGSSFVRL--PFAGEHNVQNATAAVAFALALGVSLEDIVKGLEQAQGAKGRLNFIQKTPHLFIDDTYNANPTSMRAAAQ---------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77068 for 1786 contacts (-43.2/contact) +
2D Compatibility (PS) -23870 + (NN) -4078 + (LL) 15624
1D Compatibility (HY) -8400 + (ID) 2900
Total energy: -100692.0 ( -56.38 by residue)
QMean score : 0.370
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