Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYKELATFLKVLSDSSRLEILDLLSCGELCACDLLAHFQFSQPTLSYHLKALVKTNLVTTRKIGNKHLYQLNHNIFESVINNLSKVHTSNQRCFCHNLKTGEC
4OMY Chain:A ((20-102))
------AGFLSAMANPKRLLILDSLVKEEMAVGALANKVGLSQSALSQHLSKLRAQNLVSTRRDAQTIYYSSSSDSVMKILGALSEIYG---------------
General information:
TITO was launched using:
RESULT:
Template:
4OMY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73731 for 552 contacts (-133.6/contact) +
2D Compatibility (PS) -8807 + (NN) -2458 + (LL) 1296
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: -89800.0 ( -162.68 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_4OMY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OMY-query.scw
PDB file :
Tito_Scwrl_4OMY.pdb
: