Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDNSTKYLLYIQTATSNHLETNCVFLHCDYILKVPINKLVSYYAKLHLSSQSVLIETAKNILNINKLVPIYINPKTILFPLKHKRAPIQIYINAHYIVGMTAIENSTLIHFQEGIQLEVDEPFSLVSKKCHESLALKHFIENTISN |
| 1YR1 Chain:A ((194-230)) | --------------------------------------------------------------------------------------------------------EDRVIVYMNDGYEVSATI--RQFADKLSHYPAIAAALDR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8500 for 189 contacts (-45.0/contact) +
2D Compatibility (PS) -3763 + (NN) 969 + (LL) 8864
1D Compatibility (HY) -2000 + (ID) 200
Total energy: -4630.0 ( -24.50 by residue)
QMean score : 0.333
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