Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITFENIQQLEKYTLMTMHGLFNQLKLGIISIDNAEHTLFTPYMMESLSSLGVKPDIIDLIHKGTELEDFAAFNLSIEDTVTVCLQRTEELLNQYKNVEFNDKILINWRIIQE
2P1I Chain:A ((220-262))
---------------------------ELISRDEGLHTDFNCLIYSLLENKLPENVVQNIVKEAVEVERS-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2P1I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -349 for 163 contacts (-2.1/contact) +
2D Compatibility (PS) -4462 + (NN) 2414 + (LL) 6948
1D Compatibility (HY) -2000 + (ID) 450
Total energy: 2101.0 ( 12.89 by residue)
QMean score : -0.008
(partial model without unconserved sides chains):
PDB file :
Tito_2P1I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P1I-query.scw
PDB file :
Tito_Scwrl_2P1I.pdb
: