Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSKDKDPKLNYHEEENSMVT-DFEDLKELGKEMEQISDQNDQEKNSEEDSQ------------------------------------------------------------------------------------ |
| 4YHC Chain:A ((2-468)) | GWSDHDELSTDTTLHEEKFRIEPVPVHHQLDILKIAVSENYKTFASVGLDRSLVVWDLRQWCTKLVLSKEQMPRTLKAIALDPQGNYVSLFSKDTLFILNVESPSLMLQHSYHSKPNSKLNVFWMPGTHKDDEWKNFELVVVESSGEIQVFSLTIEIEGADIALVEKFQLSSPIIKSISIVSPTANRIASLTESGEVTVYSKKGPVWSPKILSQNKNYLTETKKDIYGIAMADILFLARDSGVDMIDLKNDELLHSFTLPPIKVNTFSVGVSNSRFVNGQFRVSSISFCFTHAVTEKVLYYYYGNESNESYIILNKWDQQPNLVDVHDPDNSLASLTFDELQENIHEVEDAS-----------ESVMSSDGLYIFGMRRKSSSGISGETQVWEVWMYSQSEKKHRSKSLKMYNSLIIADPGPSLAVSDRCVAIVLGNYVALVGYGSEIFR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4503 for 101 contacts (44.6/contact) +
2D Compatibility (PS) -3974 + (NN) 468 + (LL) 276
1D Compatibility (HY) -800 + (ID) 500
Total energy: -27.0 ( -0.27 by residue)
QMean score : 0.392
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