Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA
3IP4 Chain:C ((3-94))
--KVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTI------
General information:
TITO was launched using:
RESULT:
Template:
3IP4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -364 for 386 contacts (-0.9/contact) +
2D Compatibility (PS) -9798 + (NN) -2798 + (LL) 664
1D Compatibility (HY) -10000 + (ID) 4600
Total energy: -26896.0 ( -69.68 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_3IP4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IP4-query.scw
PDB file :
Tito_Scwrl_3IP4.pdb
: