Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKLQDVIVQEMKVKKRIDSAEEIMELKQFIKNYVQSHSFIKSLVLGISGGQDSTLVGKLVQMSVNELREEGIDCTFIAVKLPYGVQKDADEVDQALRFIEPDEIVTVNIKPAVD----QSVQSLKEAGIVLTDFQKGNEKARERMKVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAYLGAPKELYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGKPVTPEEQKVIENHYIRNAHKRELAYTRY-TWPKS
2PZA Chain:A ((3-272))---LQEQIMKALHVQPVIDPKAEIRKRVDFLKDYVKKTG-AKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNATFIAVRLPYKVQKDEDDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLDES---LTDFNKGNVKARIRMVTQYAIGGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTKRQGRALLQELGADERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLEGKTVPADVAEKIEKRYTVSEHKRQVPASMFDDWWK-


General information:
TITO was launched using:
RESULT:

Template: 2PZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43169 for 2180 contacts (-19.8/contact) +
2D Compatibility (PS) -28683 + (NN) -14494 + (LL) 572
1D Compatibility (HY) -19600 + (ID) 6700
Total energy: -112074.0 ( -51.41 by residue)
QMean score : 0.460

(partial model without unconserved sides chains):
PDB file : Tito_2PZA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PZA-query.scw
PDB file : Tito_Scwrl_2PZA.pdb: