Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLYYLGPKGTFSYLACRQYFSEN------EATFQPKSNLFEVIKAVADDDTSIGVVPIENSIEGTINIVADALAQQ-DVFAHGEIRLDINFALYGNGTDSISDIKKVYSIAPAISQTTNYIHQHQFDYDYVDSTIQSLTKIENGVAAIAPLGSGEAYGFTPIDTHIEDYPHNVTRFLVIKNQQQF-----------DQNATS-LMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQADSAIT-TDIKKVIAILETLDFKVEMIGAFN |
3LUY Chain:A ((7-287)) | RKLFYLGPQGTFTHQAAVNAAQELARFEPQGFDLMPMDDVPQILDAAQHGD-GWGIVAWENNVEGYVVPNLDALIDAKDLVGFARVGVNVEFDAYVAQGADPAEARIATAHPHGLAQCKRFIAEHRLSTQPATSNAAACRDLIPGEIAFGPAICGELYDITRIGTAIQDYQGAATDFLVLSPRAEVARLLAKPRAEANVEYESVLTLIPL--VTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTLDAAPWEERFRDALVEIAEHGDWAKTLAVYP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199579 for 2107 contacts (-94.7/contact) +
2D Compatibility (PS) -28461 + (NN) -5926 + (LL) 120
1D Compatibility (HY) -9600 + (ID) 3200
Total energy: -246646.0 ( -117.06 by residue)
QMean score : 0.496
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