Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKKFFFIG---------LLVFVVFFTAATIIWFSYDKNKYGTKQYDKTFKDDAFDNVSINLDSTELRIKRGNQFRVKYDGDNDILINI-VDKTLKISDKRSKTRGYAIDMNPFHENKKTLTIEMPDKMIKRLNLSSGAGSVRISDVDLENTSIQSINGEVVIKNSNLDALDSKTNNSSTYISKSNIKNSNIKVVIGTLQIDKSQIKQSIFLNDHGDIEFKNMPSKVDAKASTKQGDIRFKYDSKPEDTILKLNPGT-GDSVVKNKTFTNGKVGKSDNVLEFYTIDGNIKVE------ |
| 4LXU Chain:A ((1-273)) | GHMIKICIAGKNNIAVNSLQFILKNYFEADQIVVIP-NKNDKGIDSWQKSLLKFALDNNIKIVTLDEI-----------YNIEQIIFFSLEFDQIIKIENFKSD-RLFNIHFSALPKYKGVFTSITP---ILNNELESGVTLHRIDN-GIDTGNIIDQHCFPIDINDTARDLYFNYLKYGESIFKKNIQTIINNSY---KDLKQTNINSSYF--SRKDI---NLVHKINFKKTSFEIHNQIRAFIFQEYQLPIINNSKIIKSILANEFIGYNVFEEFENYFIISGIDG-FKIIAQKLNK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LXU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 20275 for 1895 contacts (10.7/contact) +
2D Compatibility (PS) -26591 + (NN) -6482 + (LL) 1756
1D Compatibility (HY) -15200 + (ID) 2750
Total energy: -28992.0 ( -15.30 by residue)
QMean score : 0.270
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