Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------MNTLVNMFFDFIIKLAKAIGIVGGVNACSSLFDEPKVPAELTNLYDK----- |
1MBM Chain:A ((7-204)) | KARGNVGFVAGSSYGTGSVWTRNNEVVVLTASHVVGRANMATLKIGDAMLTLTFKKNGDFAEAVTTQSELPGNWPQLHFAQPTTGPASWCTATGDEEGLLSGEVCLAWTTSGDSGSAVVQGDAVVGVHTGSNTSGVAYVTTPSGKLLGADTVTLSSLSKHFTGPLTSIPKDIP--DNIIA-----DVDAVPRSLAMLIDGLSNRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MBM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20611 for 237 contacts (-87.0/contact) +
2D Compatibility (PS) -4149 + (NN) -1294 + (LL) 704
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -28300.0 ( -119.41 by residue)
QMean score : 0.361
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