Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINVTLKQIQSWIPCEIEDQFLNQEINGVTIDSRAISKNMLFIPFKGENVDGHRFVSKALQDGAGAAFYQRGTPIDENVSGPIIWVEDTLTALQQLAQAYLRHVNPKVIAVTGSNGKTTTKDMIESVLHTEFKVKKT--------QGNYNNEIGLPLTILELDNDTEISILEMGMSGFHEIEFLSNLAQPDIAVITNIGESHMQDLGSREGIAKAKSEITIGLKDNGTFIYDGDEPLLKPHVKEVENAKCISIGVATDNALVCSVDDRDTTGIS--FTI----NNKEHYDLPILGKHNMKNATIAIAVGHELGLTYNTIYQNLKNVSLTGMRMEQ---HTLENDITVINDAYNASPT----SMRAAIDTLGTLTGRRILILGDVLELGENSKEMHIGVGNYLEEKHIDVLYTFGNEAKYIYDSGQQHVEKAQHFNSKDDMIEVLTSDLKAHDRVLVKGSRGMKLEEVVNALIS |
| 1GQY Chain:A ((121-372)) | ------------------------------------------------------------------------------------------------------------IAVAGTHGKTTTTAMI-SMIYTQAKLDPTFVNGGLVKSAGKNAHLGASRYLIAEADESDASFLHL---------------QPMVSVVTNMEPD------DFEKMKATYVKFLHNLPFYGLAVMCADDPVLMELVPKV-GRQVITYGFSEQADY--RIEDYEQTGFQGHYTVICPNNERINVLLNVPGKHNALNATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGD---KRIVMI-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70286 for 1732 contacts (-40.6/contact) +
2D Compatibility (PS) -23457 + (NN) -1052 + (LL) 15560
1D Compatibility (HY) -14000 + (ID) 3350
Total energy: -96585.0 ( -55.77 by residue)
QMean score : 0.392
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