Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLESKWGLRFIAFLLALFFFLSVNNVFGNIFNTGNLGQKSSKTIQDVPVEILYNTKD-LHLTKAPETVNVTISGPQSKIIKIENPEDLRVVIDLSNAKAGKYQEKYQVKGLADDIH-YSVKPKLANITLENKVTKKMTVQPDVSQSDIDPLYKITKQEVSPQTVKVTGGEEQLNDIAYLKATFKTNKKINGDTKDVAEVTAFDKKLNKLNVSIQPNEVNLQVKVEPFSKKVKVNVKQKGSLADDKELSSIDLEDKEIEIFGSRDDLQNISEVDAEVDLDGISESTEKTVKINLPEHVTKAQPSETKAYINVK |
| 3LYW Chain:A ((4-86)) | -------------------------------------------TLTLSLIAKNTPANSMIMTKLPS-VRVKTEGYNPSI----NVNELFAYVDLSGSEPGEHDYEVKVE-PIPNIKIVEISPRVVTLQLEHH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 2273 for 479 contacts (4.7/contact) +
2D Compatibility (PS) -8175 + (NN) 3051 + (LL) 14644
1D Compatibility (HY) 1200 + (ID) 450
Total energy: 12543.0 ( 26.19 by residue)
QMean score : 0.195
|
|
|