Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNHIEISKDVKIPVLGFGVFQIPQEQTAEAVKEAIKAGYRHIDTAQSYLNETEVGQGIEASGIDRSELFITTKVWIENVNYEDTIKSIERSLQRLNLDYLDLVLIHQPY---NDVYGSWRALEELKENGKIKAIGVSNF---GVDRIVDLGIHNQIQPQVNQIEINPFHQQEEQVAALQQENVVVEAWAPFAEGKNQLFQNQLLQAIADKYNKSIAQVILRWLVERDIVVLAKSVNPERMAQNLDIFDFELTEEDKQQIATLEESNSQFFSHADPEMIKALTSRELDV |
3WBY Chain:A ((25-281)) | -----------MPQIGLGVWETPPDETAEVVKEAVKLGYRSVATARLYKNEEGVGKGLE----DHPEIFLTTKLWNDEQGYDSTLRAYEESARLLRRPVLDLYLIHWPMPAQGQYVETWKALVELKKSGRVKSIGVSNFESEHLERIMDA---TGVVPVVNQIELHPDFQQRALREFHEKHNIRTESWRPL--GKGRVLSDERIGKIAEKHSRTPAQVVIRWHLQNGLIVIPKSVNPKRLAENLDVFGFVLDADDMQAIEQMDRKDGRM--GADPNTAK--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WBY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112876 for 2072 contacts (-54.5/contact) +
2D Compatibility (PS) -27288 + (NN) -11900 + (LL) 2316
1D Compatibility (HY) -20400 + (ID) 5250
Total energy: -175398.0 ( -84.65 by residue)
QMean score : 0.499
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