Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKAKEIRDLTTSEIEEQIKSSKEELFNLRFQLATGQLEETARIRTVRKTIARLKTVAREREIEQSKANQ
3DLL Chain:V ((1-56))
MKPSEMRNLQATDFAKEIDARKKELMELRFQAAAGQLAQPHRVRQLRREVAQLNTV-------------
General information:
TITO was launched using:
RESULT:
Template:
3DLL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2630 for 295 contacts (-8.9/contact) +
2D Compatibility (PS) -5480 + (NN) 1920 + (LL) 1200
1D Compatibility (HY) -5600 + (ID) 1200
Total energy: -11790.0 ( -39.97 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_3DLL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DLL-query.scw
PDB file :
Tito_Scwrl_3DLL.pdb
: