Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLVTATTLTAGIGTALVGQAHHADAAENYTNYNNYNYNTTQTTTTTTTTTTTSSISHSGNLYTAGQCTWYVYDKVGGEIGSTWGNANNWAAAAQGAGFTVNHTPSKGAILQSS-------------EGPFGHVAYVESVNSDGSVTISEMNYSGGPFSVSSRTISASEAGNYNYIHI |
2IF6 Chain:A ((4-50)) | --------------------------------------------------------------------------------------------------------QPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRN--KKPYVFEAV-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5593 for 159 contacts (-35.2/contact) +
2D Compatibility (PS) -3970 + (NN) -4598 + (LL) 5700
1D Compatibility (HY) -800 + (ID) 300
Total energy: -9561.0 ( -60.13 by residue)
QMean score : 0.275
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