Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIVEVEHQRQGVDLIKIDNDE-TKIIFTNYGARVVSWKYHDNNIVLGNVVEADEFYHSNPFKFGASIGRYSGRIDNAKFKLKGKEYQLEKNNGEHHLHGGCHGLDNKLFDYEIRNEIAQIKVIFKTVLKSADDHFPGDIDVTITHIYDADHQWSIEYEAVASEDTLFSPMNHVYFNLNRD-NNVVDNH--RISSNQLDMYVLDERNIVTGDILDLHEV---FEDNKIKLSDIFTSQHAQLSQQMTRFGGLDHPFTVGEHKMYVENHEFMLE-----VDTDMPHVVFFTFNQPDEWDSPFNIYKP--HSGFTLETQFLPNDINLYGEKAPSI----LKAGEVFNSKTSFRIEEKVEND |
| 1NSV Chain:A ((2-340)) | -SIKIRDFGLGSDLISLTNKAGVTISFTNLGARIVDWQKDGKHLILG-FDSAKEYLEKDAYP-GATVGPTAGRIKDGLVKISGKDYILNQNEGPQTLNGGEESIHTKLWTYEVTDLGAEVQVKFSLVSNDGTNGYPGKIEMSVTHSFDDDNKWKIHYEAISDKDTVFNPTGHVYFNLNGDASESVENHGLRLAASRF-VPLKDQTEIVRGDIVDIKNTDLDFRQEK-QLSNAFNSNMEQV--QLVK--GIDHPFLLDQLGLDKEQARLTLDDTSISVFTDQPSIVIFTANFGD-LGTLYHEKKQVHHGGITFECQVSPGS-----EQIPELGDISLKAGEKYQATTIYSLHTKL--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1NSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -103079 for 2698 contacts (-38.2/contact) +
2D Compatibility (PS) -34807 + (NN) -8444 + (LL) 712
1D Compatibility (HY) -24000 + (ID) 5850
Total energy: -175468.0 ( -65.04 by residue)
QMean score : 0.464
|
|
|