Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRNRVMNSVVNKYLLHNRSIMFKNDQDVERFFYKREIENRKKHKQPSTLNVKANLEKLSLDDMQVFRFNFRHQIDKKILYIHGGFNALQPSPFHWRL---LDKITLSTLYEVVLPIYPKTP-EFHIDDTFQAIQRVYDQLVSEVGHQN-VVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDAVLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYP--IRQSHKAIKQIAKSIDEDVTQNN |
| 3K6K Chain:A ((83-309)) | ------------------------------------------------------------------------------ILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAA----YRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNSN-LADRDFLAEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEALLSDSTTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARIS--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3K6K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -139647 for 1982 contacts (-70.5/contact) +
2D Compatibility (PS) -23477 + (NN) -10397 + (LL) 6864
1D Compatibility (HY) -9600 + (ID) 2900
Total energy: -179157.0 ( -90.39 by residue)
QMean score : 0.534
|
|
|