Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKMNKLVKSSVATSMALLLLSGTANAEGKITPVSVKKVDDKVTLYKTTATADSDKFKISQILTFNFIKDKSYDKDTLVLKATGNINSGFVKPNPNDYDFSK-LYWGAKYNVSISSQSND-SVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGLSGGLNGNTAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNELFLAGRQSSAYAGQNFIAQHQMPLLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMDLYQ-----IRWNGFYWAGANYKN-FKTRTFKSTYEIDWENHKVKLLDTKETENNK |
| 4IYT Chain:A ((12-288)) | ----------------------------------IENIGDGAEVVKRTEDTSSDKWGVTQNIQFDFVKDKKYNKDALILKMQGFINSKTTYYNYKNTDHIKAMRWPFQYNIGL--KTNDPNVDLINYLPKNKIDSVNVSQTLGYNIGGN--FNSGP----NGSFNYSKTISYNQQNYISEV-EHQNSKSVQWGIKANSFITS----LGKMSGHDP---NLFVGYKPASQNPRDYFVPDNELPPLVHSGFNPSFIATVSHEKGSGDTSEFEITYGRNMDVTHATRRTT---NSYLEGSRIHNAFVNRNYTVKYEVNWKTHEIKV---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41521 for 2068 contacts (-20.1/contact) +
2D Compatibility (PS) -27645 + (NN) -7952 + (LL) 2556
1D Compatibility (HY) -20400 + (ID) 4450
Total energy: -99412.0 ( -48.07 by residue)
QMean score : 0.348
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