Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKTIMASSLAVALGVTGYAAGTGHQAHAAEVNVDQAHLVDLAHNHQDQLNAAPIKDGAYDIHFVKDGFQYNFTSNGTTWSWSYEAANGQTAGFSNVAGADYTTSYNQGSDVQSVSYNAQSSNSNVEAVSAPTYHNYSTSTTSSSVRLSNGNTAGATGSSAAQIMAQRTGVSASTWAAIIARESNGQVNAYNP--SG-ASGLFQTMP-GWGP-------------------TNTVDQQINAAVKAYKAQGLGAWGF |
1HML Chain:A ((39-124)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIALPELICTMFHTSGYDTQAIVENNESTEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDIKGIDYWL- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1HML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -17650 for 363 contacts (-48.6/contact) +
2D Compatibility (PS) -6843 + (NN) -3184 + (LL) 8540
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -22987.0 ( -63.33 by residue)
QMean score : 0.585
|
|
|