Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHPRKTLQLPLILKIILNLALIGIVIIVLTHTEFQLNAGDSNVFLLNWDIRGLTSYIFSFLILVALVSKLILIFITRRQRTS----
1G6Z Chain:A ((-2-69))
SPKQEEYEVERIVDEKLD------------------RNGAVKLYRIRWLNYSSRSDTWEPPENLSGCSAVLAEWKRRKRRLKGSNS
General information:
TITO was launched using:
RESULT:
Template:
1G6Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32577 for 332 contacts (-98.1/contact) +
2D Compatibility (PS) -6585 + (NN) 65 + (LL) 2380
1D Compatibility (HY) 1600 + (ID) 300
Total energy: -35417.0 ( -106.68 by residue)
QMean score : 0.154
(partial model without unconserved sides chains):
PDB file :
Tito_1G6Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G6Z-query.scw
PDB file :
Tito_Scwrl_1G6Z.pdb
: