Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------MNIEYKKGIFLAL-------SAYILWGILPIYWQFVDAIGAFEILAFRIIFSAIFM-IFILAVGQKQRNAFQRDMNQLLGKPIQLLAIVVAGYVITLNWGTFIWAVTNGHVLQTSLG-------YYINP------LVSILLALIFLKERFNKFEWLAILFA-FIGVLYMTLKIGEFPIVSI-ILALSFGTYG------------------LLKKVVHIDA-----------ISSITIECIVTAPAG-LIYVIYLWQQHQMSFGLNMSSFWLLFSGAITAIPLILFSAGAKRIPLSLIGFIQYVGPT-IMFVLGIFVFKEPFSIDQLITFIFIWTGIVLYSLSQYIKLKKHPVAKTL------------------------------------------ |
| 3OH8 Chain:A ((2-513)) | SLTTSHFIPFPREMVWDWHTRKGAVARLTPPFIPLNPITQAERLADGTTIFSLPAGLKWVARHDLSGFLNGSRFTDVCLTAPVKALANWRHVHNFVDQDGGTLITDSVSTRLPASTLTGMFAYRQTQLIEDLKFLSRTSTLFDGSPLTVAITGSRGLVGRALTAQLQT--GGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGEFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSGGKFGDGTSWFS-WIAIDDLTDIYYRAIVDAQISG-PINAVAPNPVSNADMTKILATQGAEELALASQRTAPAALENLSHT-FRYTDIGAAIAHELGYEQLADFAQQQEIEANLEDPEEVEQSILSSILNFRRKRNDLEHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -245183 for 2135 contacts (-114.8/contact) +
2D Compatibility (PS) -29615 + (NN) 6577 + (LL) 756
1D Compatibility (HY) 26400 + (ID) 900
Total energy: -241965.0 ( -113.33 by residue)
QMean score : 0.053
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