Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAFLGALEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNVIPPKTSYKESLSTIASVEYAIAHVGVQNLIICGHSDCGACGSIHLIHDETTKAKTPYIANWIQFLEPI----KEELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQERVINNE-LKIFGWHYIIETGRIYNYNFESHFFEPIEETIKQRISHENF
4ZNZ Chain:A ((20-210))
---------------EEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLV-----IHTDLNCLSVVQYAVDVLEVEHIIICGHYGCGG------VQAAVENPELGLINNWLLHIRDIWFKHSSLLGEMPQ-----ERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKL
General information:
TITO was launched using:
RESULT:
Template:
4ZNZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113358 for 1404 contacts (-80.7/contact) +
2D Compatibility (PS) -19958 + (NN) -8615 + (LL) 1776
1D Compatibility (HY) -14400 + (ID) 3000
Total energy: -157555.0 ( -112.22 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_4ZNZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZNZ-query.scw
PDB file :
Tito_Scwrl_4ZNZ.pdb
: