Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGTLIEKWFGFSQIREELEARISELEDENTELLREREYLAAETSELKDANDQLRQKNDKLFITKDKLTKENTELFAENESLSVKISGLEHSNDQLWQNNNKLTKEKAELKTEKDILAKENTRLLAARDRLTEEKRELTTEKERLKRENTELTHKITELTKENKALTTENDKLNHQVTALTNERDSLEQERARLQDAHGFLEKRCTNLEKENQRLTDKLKQLESAQ------KSLENTNNQLRQALENSNVQLAQAKEKIAIEKSE---LEREIARLKSLEGMEAKSDLDLHNRRLASANEDLKRQNRKLEEENIALKERVDGLNEQLSKLQPQKPQ
3VKG Chain:A ((1912-2104))------------------------------------------------------------------------------------------------------------------------------RDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQLDVRNKEIAVQKVKAYADL-------PLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKT-ESSKVKNKVDRSIALLDNLNSERGRWEQQSENFNTQMSTVVGDVVLASAFLAYIGFF


General information:
TITO was launched using:
RESULT:

Template: 3VKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 68796 for 1014 contacts (67.8/contact) +
2D Compatibility (PS) -19863 + (NN) -16782 + (LL) 10820
1D Compatibility (HY) -2000 + (ID) 1900
Total energy: 39071.0 ( 38.53 by residue)
QMean score : 0.688

(partial model without unconserved sides chains):
PDB file : Tito_3VKG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VKG-query.scw
PDB file : Tito_Scwrl_3VKG.pdb: