Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKGKSVKSTKKSVGMPPKTPKTDNNANSHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVTNKESALEYLKANLSSQFLYTEMLSLKLTYESTLQQDLKKILGIEEVIMLSTSPMELRLANQKLGNRFIKTLQAMNELDMGAFFNAYAQTTKDPTHATSYGVFAASLNMELKKALRHYLYAQTSNMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCAASVQNDIKAMQHESLYSRLYMS |
| 1VD7 Chain:A ((6-21)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAARLAKMSAYAAQRLAN--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 934 for 47 contacts (19.9/contact) +
2D Compatibility (PS) -1566 + (NN) -75 + (LL) 17652
1D Compatibility (HY) 400 + (ID) 100
Total energy: 17245.0 ( 366.91 by residue)
QMean score : 0.319
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