Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQYALLFPGQGSQCIGMGKSFYESHTLAKELFERASNVLKVDMKKTL-FEENELLKESAYTQPAIYLVSYIAYQLLNKQANGGLKPVFALGHSLGEVSAVSLSGALDFEKALKLTHQRGKMMQEACANKDASMMVVLGVSEESLLSLCQRT---KNVWCANFNGGMQVVLAGVKDDLKALEPTLKEMGAKRVVFLEMSVASHCPFLEPMIFKFQELLEKSLKDKFHFEIISNATNEAYHNKSKAVE-LLSLQLTQPVRYQDCVKSNNDR-VDVFFELGCGSVLKGLNKRLSNKPTISVGDNKGLDEAIEFLEEYV |
| 3TQE Chain:A ((8-298)) | --FAFVFPGQGSQHLGMLAELGLQQPIVLETFQQASSALAYDLWALVQHGPQERLDQTQFTQPALLTADVAIFRCW--EALGGPKPQVMAGHSLGEYAALVCAGALKFEEAVKLVEKRGQYMQEAVPVGEGAMGAIIGLNEAEIESICENAALGQVVQPANLNSTDQTVISGHSEAVDRALNMAKTEGAKIAKRIPVSVPSHCPLMQPAADRLAQDIAKISIDSPKVPVIHN-VDVVDHNEANIIRGALIKQLVRPVRWVETIKYIEEQGIKVFMECGPDNKLAGLIKRIDRQSEILPLTTTELILTAIKRLTH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TQE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184609 for 2639 contacts (-70.0/contact) +
2D Compatibility (PS) -30721 + (NN) -11217 + (LL) 428
1D Compatibility (HY) -13200 + (ID) 4700
Total energy: -244019.0 ( -92.47 by residue)
QMean score : 0.540
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