Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKPKKNTLPCSLSVKMSYFMRLLIKWRTRSLSHKMMTLVQILSILALASKASEDLEEQLKKIKDYIYKTLNAKIASDVYDRVLILVNEYCANEELFDKESVKISDLLI--------------------QDIQLYALVDEMLKEDKYQVQHTILKGIIKRKYDEAYSLNSEDRILLEYQERLLEPSYASFSNKKFK |
1TA8 Chain:A ((5-111)) | -----------------------------------------PLTLTAATTRAQE-LRKQLNQYSHEYYVKDQPSVEDYVYDRLY---------KELVDIET-EFPDLITPDSPTQRVGGKVLSGFEKAPHDIPMYSLNDGFSKEDIFAFDERVRKAIGKPVAYCCELKIDGLAISLRYENGVFVRGATRGDGTVGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TA8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6235 for 432 contacts (-14.4/contact) +
2D Compatibility (PS) -8919 + (NN) -460 + (LL) 4408
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: -19056.0 ( -44.11 by residue)
QMean score : 0.220
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