Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKIVLVAIALLISGCASYKITPEHVTSYNNGIQVMTSTQARSKVQLEIAQSKLKGLN-ESPLVLYVAAQVLEGKPVVFSRKAISVSINQTNLPVLSLRQVMKSSFDFEGILQSFNISVPTAPIDNINMIT-PPMFYYGQGSFLAYNGMMYGGMGMYGPGFGMMMMDDVEEQEVMQESRQALKILAIN-YLKKNTLNVENKAKGGFVVVDTKNLKTPGVVVVKVFLEDEIHTFKIDISKM |
| 3GQQ Chain:A ((12-192)) | -----------------KQPIGPEDVLGLQRITGDYLCSPEENIYKIDFVRFKIR--DMDSGTVLFEIKKPPNAGRFVRYQ-------------------FTPAFLRLRQVGATVEFTVGDKPVNN---FRMIERHYFRNQLLKSFD-----------FHFGFCIPSSKNTCEHIYDFPPLSEELISEMI------------RHPYETQSDSFYFVDDRLVM-----HNKADYSYS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GQQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28293 for 1108 contacts (-25.5/contact) +
2D Compatibility (PS) -17157 + (NN) 195 + (LL) 6124
1D Compatibility (HY) -6400 + (ID) 900
Total energy: -46431.0 ( -41.91 by residue)
QMean score : 0.102
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