Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLILAVFFTLTLSVSAKEVKIVFLETSDIHGRLFSYDYAVGEQKPNNGLTRIATLIKKQRAENKNVVLIDSGDLLQGNSAELFNDEPIHPLVRAENDLKFDIRVLGNHEFNFSKDFLEKNIKGFNGDVVNANIIKIADNKPFVKPYIIKKIDGVRVAVVGFLVPHVPTWEASTPEHFAGLEFLDAEEALKKTLSELKG--KYDILIGAFHLGRED--EKGGD--GIPDLAKKFP--QFDIIFAGHEH-----AVYNTK--------------VGKVHTIEPGAYGAYLAKGVVVFDTKTKKKIITTENLPTKDAPEDEELAKKYEYVDKKSKE--YANEVVGEVTKTFIDRPDFITGEEKITT------------MPTAALQETPVIELINKVQKYYAKADVSAAALFNFGANLKKGPFKRKDVAYIYKFANTLIGVRITGENLLKYMEWSYKFYNQLQPGDLTISFNENVRGYNFDMFSGVKYQVDVTKPAGQRIINPTINGKPINPKAVYKLAINNYRFGTLSTTLKLVTDADRYYDSYDALQDNGQIRDLIIKYITEEKNAKVTPELEHNWEIINYDFKNPLLEKLAEKLKEGSVKIPTSKDGRTLNVKSIKESEVE |
| 1OIE Chain:A ((5-473)) | ------------------KTYKITVLHTNDHHGHFWRNEY--GEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQD--AEPDFRGMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDD--TAKIGNPEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGCNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEF-RNGEMKMVNYQLIPVN-------LKKKV------SERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAAQMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYL----TAVAQMKPDSGA-----------YPQFANVSF---VAKDG--KLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPRLDNKCGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQE------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OIE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143467 for 3570 contacts (-40.2/contact) +
2D Compatibility (PS) -45561 + (NN) -14381 + (LL) 7312
1D Compatibility (HY) -18400 + (ID) 5450
Total energy: -219947.0 ( -61.61 by residue)
QMean score : 0.455
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